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ABCB11 protein (Latimeria chalumnae) - STRING interaction network
"ABCB11" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCB11Uncharacterized protein; ATP-binding cassette, sub-family B (MDR/TAP), member 11 (594 aa)    
Predicted Functional Partners:
ABCF2
ATP-binding cassette, sub-family F (GCN20), member 2 (533 aa)
     
   
  0.675
ABCF3
ATP-binding cassette, sub-family F (GCN20), member 3 (745 aa)
     
   
  0.670
ABCE1
ATP-binding cassette, sub-family E (OABP), member 1 (600 aa)
     
   
  0.643
ICMT
Protein-S-isoprenylcysteine O-methyltransferase; Isoprenylcysteine carboxyl methyltransferase (231 aa)
   
   
  0.557
TYMS
Thymidylate synthase (309 aa)
   
   
  0.518
ABCF1
ATP-binding cassette, sub-family F (GCN20), member 1 (908 aa)
     
   
  0.489
FNTA
Farnesyltransferase, CAAX box, alpha (363 aa)
           
  0.459
ABCG5
ATP-binding cassette, sub-family G (WHITE), member 5 (438 aa)
     
 
  0.414
ENSLACG00000002183
Uncharacterized protein; ATP-binding cassette, sub-family C (CFTR/MRP), member 13 (385 aa)
     
 
  0.406
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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