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GPT2 protein (Latimeria chalumnae) - STRING interaction network
"GPT2" - Glutamic pyruvate transaminase (alanine aminotransferase) 2 in Latimeria chalumnae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPT2Glutamic pyruvate transaminase (alanine aminotransferase) 2 (484 aa)    
Predicted Functional Partners:
GLUD1
Glutamate dehydrogenase 1 (541 aa)
   
 
  0.953
AGXT
Alanine-glyoxylate aminotransferase (426 aa)
   
  0.921
NAGS
N-acetylglutamate synthase (508 aa)
     
 
  0.912
GOT1L1
Glutamic-oxaloacetic transaminase 1-like 1 (405 aa)
     
  0.908
GOT1
Glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1) (399 aa)
     
  0.908
GOT2
Glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2) (392 aa)
     
  0.908
FH
Fumarate hydratase (491 aa)
     
 
  0.878
SDHA
Succinate dehydrogenase complex, subunit A, flavoprotein (Fp); Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q) (670 aa)
     
 
  0.873
IDH2
Isocitrate dehydrogenase 2 (NADP+), mitochondrial (402 aa)
     
 
  0.866
IDH1
Isocitrate dehydrogenase 1 (NADP+), soluble (414 aa)
     
 
  0.866
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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