STRINGSTRING
MMP16 protein (Latimeria chalumnae) - STRING interaction network
"MMP16" - Matrix metallopeptidase 16 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP16Matrix metallopeptidase 16 (membrane-inserted) (569 aa)    
Predicted Functional Partners:
TIMP2
TIMP metallopeptidase inhibitor 2 (221 aa)
     
  0.874
TIMP3
TIMP metallopeptidase inhibitor 3 (216 aa)
     
  0.700
ENSLACG00000001720
Uncharacterized protein (202 aa)
       
  0.700
FOSL2
FOS-like antigen 2 (332 aa)
     
  0.637
PCSK4
Proprotein convertase subtilisin/kexin type 4 (768 aa)
     
  0.609
FURIN
Furin (paired basic amino acid cleaving enzyme) (801 aa)
     
  0.609
TIMP4
TIMP metallopeptidase inhibitor 4 (222 aa)
       
  0.605
ENSLACG00000007958
Uncharacterized protein (229 aa)
       
  0.599
HABP2
Hyaluronan binding protein 2 (480 aa)
     
  0.577
PCSK2
Proprotein convertase subtilisin/kexin type 2 (403 aa)
     
  0.543
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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