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STRINGSTRING
NRTN protein (Latimeria chalumnae) - STRING interaction network
"NRTN" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NRTNUncharacterized protein (144 aa)    
Predicted Functional Partners:
GFRAL
Uncharacterized protein; GDNF family receptor alpha like (220 aa)
       
 
  0.813
GFRA2
Uncharacterized protein (109 aa)
       
 
  0.685
GFRA1
annotation not available (257 aa)
       
 
  0.675
RET
Ret proto-oncogene; Belongs to the protein kinase superfamily. Tyr protein kinase family (1090 aa)
       
 
  0.603
GAS1
Growth arrest-specific 1 (259 aa)
           
  0.559
ENSLACG00000006872
Uncharacterized protein (123 aa)
       
 
  0.497
NGF
Nerve growth factor (beta polypeptide); Belongs to the NGF-beta family (272 aa)
           
  0.483
SETD7
Histone-lysine N-methyltransferase; SET domain containing (lysine methyltransferase) 7 (351 aa)
           
  0.483
CDNF
Cerebral dopamine neurotrophic factor (179 aa)
           
  0.480
ENSLACG00000003163
annotation not available (148 aa)
       
 
  0.471
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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