STRINGSTRING
NRTN protein (Latimeria chalumnae) - STRING interaction network
"NRTN" - Neurturin in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NRTNNeurturin (144 aa)    
Predicted Functional Partners:
GFRA4
Uncharacterized protein (432 aa)
       
  0.778
ENSLACG00000002586
GDNF family receptor alpha 1 (257 aa)
       
  0.778
RET
Ret proto-oncogene (1090 aa)
       
  0.747
GFRA3
GDNF family receptor alpha 3 (340 aa)
         
  0.670
YES1
V-yes-1 Yamaguchi sarcoma viral oncogene homolog 1 (539 aa)
       
  0.554
SRC
V-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian) (535 aa)
       
  0.554
DOK6
Docking protein 6 (211 aa)
         
  0.549
DOK4
Docking protein 4 (241 aa)
         
  0.549
GRB2
Growth factor receptor-bound protein 2 (292 aa)
         
  0.545
FRS3
Fibroblast growth factor receptor substrate 3 (516 aa)
         
  0.545
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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