• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
HACL1 protein (Latimeria chalumnae) - STRING interaction network
"HACL1" - 2-hydroxyacyl-CoA lyase 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HACL12-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family (554 aa)    
Predicted Functional Partners:
ECHDC2
Enoyl CoA hydratase domain containing 2; Belongs to the enoyl-CoA hydratase/isomerase family (348 aa)
     
 
  0.808
RPP40
Ribonuclease P/MRP 40kDa subunit (361 aa)
           
  0.756
BHMT
Betaine-homocysteine methyltransferase; Involved in the regulation of homocysteine metabolism (276 aa)
   
   
  0.658
UROC1
Urocanate hydratase 1 (636 aa)
     
   
  0.655
AUH
AU RNA binding protein/enoyl-CoA hydratase (282 aa)
     
 
  0.628
AMACR
Alpha-methylacyl-CoA racemase; C1q and tumor necrosis factor related protein 3 (402 aa)
   
   
  0.608
ALDH3A2
Aldehyde dehydrogenase 3 family, member A2a; Belongs to the aldehyde dehydrogenase family (397 aa)
   
   
  0.592
DECR1
2,4-dienoyl CoA reductase 1, mitochondrial (326 aa)
   
 
  0.587
ANKRD28
Ankyrin repeat domain 28b (934 aa)
           
  0.583
RBM28
RNA binding motif protein 28 (559 aa)
           
  0.581
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
Server load: low (8%) [HD]