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BCO1 protein (Latimeria chalumnae) - STRING interaction network
"BCO1" - Beta-carotene oxygenase 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCO1Beta-carotene oxygenase 1 (531 aa)    
Predicted Functional Partners:
ALDH1A1
Aldehyde dehydrogenase 1 family, member A1; Belongs to the aldehyde dehydrogenase family (514 aa)
     
 
  0.947
RDH10
Retinol dehydrogenase 10 (all-trans); Belongs to the short-chain dehydrogenases/reductases (SDR) family (348 aa)
         
  0.941
ENSLACG00000014384
annotation not available (284 aa)
     
 
  0.928
ALDH1A2
Aldehyde dehydrogenase 1 family, member A2; Belongs to the aldehyde dehydrogenase family (497 aa)
     
 
  0.927
RDH12
Retinol dehydrogenase 12 (all-trans and 9-cis); Belongs to the short-chain dehydrogenases/reductases (SDR) family (320 aa)
 
     
  0.923
ISX
Uncharacterized protein; Intestine-specific homeobox (171 aa)
     
   
  0.922
AOX1
Aldehyde oxidase 1 (1070 aa)
     
 
  0.919
ENSLACG00000005151
Aldehyde oxidase 3 (1307 aa)
     
 
  0.919
ENSLACG00000000989
annotation not available (178 aa)
     
 
  0.919
DHRS9
Uncharacterized protein; Dehydrogenase/reductase (SDR family) member 9; Belongs to the short-chain dehydrogenases/reductases (SDR) family (339 aa)
     
 
  0.917
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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