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PTK2B protein (Latimeria chalumnae) - STRING interaction network
PTK2B protein tyrosine kinase 2 beta in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTK2BPTK2B protein tyrosine kinase 2 beta (876 aa)    
Predicted Functional Partners:
PXN
Paxillin (1112 aa)
       
  0.965
TGFB1I1
Transforming growth factor beta 1 induced transcript 1 (586 aa)
       
  0.965
LPXN
Leupaxin (367 aa)
       
  0.965
PDLIM7
PDZ and LIM domain 7 (enigma) (427 aa)
       
  0.867
PDLIM1
PDZ and LIM domain 1 (325 aa)
       
  0.867
PDLIM3
PDZ and LIM domain 3 (356 aa)
       
  0.867
PDLIM2
PDZ and LIM domain 2 (mystique) (148 aa)
       
  0.867
PDLIM5
PDZ and LIM domain 5 (629 aa)
       
  0.867
PDLIM4
PDZ and LIM domain 4 (233 aa)
       
  0.867
LDB3
LIM domain binding 3 (589 aa)
       
  0.867
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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