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DCLRE1C protein (Latimeria chalumnae) - STRING interaction network
"DCLRE1C" - DNA cross-link repair 1C in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCLRE1CDNA cross-link repair 1C (539 aa)    
Predicted Functional Partners:
MRE11A
MRE11 meiotic recombination 11 homolog A (S. cerevisiae) (710 aa)
     
  0.858
LIG4
Ligase IV, DNA, ATP-dependent (911 aa)
   
  0.844
CPSF1
Cleavage and polyadenylation specific factor 1, 160kDa (1387 aa)
     
  0.843
FANCM
Fanconi anemia, complementation group M (2075 aa)
     
  0.838
PRKDC
Protein kinase, DNA-activated, catalytic polypeptide (4083 aa)
     
  0.799
XRCC5
X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) (606 aa)
     
  0.765
CSTF1
Cleavage stimulation factor, 3’ pre-RNA, subunit 1, 50kDa (431 aa)
     
  0.762
PAPOLA
Uncharacterized protein (735 aa)
     
  0.751
PAPOLG
poly(A) polymerase gamma (743 aa)
     
  0.751
XRCC6
X-ray repair complementing defective repair in Chinese hamster cells 6 (610 aa)
     
  0.750
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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