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STRINGSTRING
DCLRE1C protein (Latimeria chalumnae) - STRING interaction network
"DCLRE1C" - DNA cross-link repair 1C in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCLRE1CDNA cross-link repair 1C (539 aa)    
Predicted Functional Partners:
XRCC5
X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) (606 aa)
     
 
  0.816
PRKAA2
Protein kinase, AMP-activated, alpha 2 catalytic subunit (553 aa)
     
      0.750
PRKAG2
Protein kinase, AMP-activated, gamma 2 non-catalytic subunit (251 aa)
     
      0.717
XRCC6
X-ray repair complementing defective repair in Chinese hamster cells 6 (610 aa)
     
 
  0.715
PRKDC
Protein kinase, DNA-activated, catalytic polypeptide (4083 aa)
     
 
  0.674
XRCC4
X-ray repair complementing defective repair in Chinese hamster cells 4 (331 aa)
       
 
  0.659
LIG4
Ligase IV, DNA, ATP-dependent (911 aa)
   
 
  0.650
FANCM
Fanconi anemia, complementation group M (2075 aa)
     
 
  0.650
NHEJ1
Nonhomologous end-joining factor 1 (303 aa)
           
  0.643
TERF2
Telomeric repeat binding factor 2 (489 aa)
     
 
  0.611
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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