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ATG16L1 protein (Latimeria chalumnae) - STRING interaction network
"ATG16L1" - Autophagy related 16-like 1 (S. cerevisiae) in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATG16L1Autophagy related 16-like 1 (S. cerevisiae) (597 aa)    
Predicted Functional Partners:
ATG5
Autophagy related 5; Involved in autophagic vesicle formation (275 aa)
     
  0.996
ATG3
Autophagy related 3 (314 aa)
     
  0.947
ATG16L2
Autophagy related 16-like 2 (S. cerevisiae) (340 aa)
     
 
 
0.801
ENSLACG00000005281
Uncharacterized protein (243 aa)
         
 
0.800
ATG12
Autophagy related 12; Ubiquitin-like protein involved in autophagic vesicle formation (145 aa)
     
  0.788
ATG7
Autophagy related 7 (593 aa)
     
 
  0.765
BECN1
Beclin 1, autophagy related (447 aa)
     
  0.677
MAP1LC3A
Microtubule-associated protein 1 light chain 3 alpha (121 aa)
     
  0.661
MAP1LC3B
Microtubule-associated protein 1 light chain 3 beta (125 aa)
     
  0.661
ENSLACG00000007813
Uncharacterized protein (142 aa)
     
  0.661
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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