STRINGSTRING
ENSLACG00000000182 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000000182" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000000182Uncharacterized protein (762 aa)    
Predicted Functional Partners:
VPS18
Vacuolar protein sorting 18 homolog (S. cerevisiae) (874 aa)
     
 
  0.943
VPS16
Vacuolar protein sorting 16 homolog (S. cerevisiae) (823 aa)
     
 
  0.939
VPS11
Vacuolar protein sorting 11 homolog (S. cerevisiae) (997 aa)
     
 
  0.851
ENSLACG00000018156
Uncharacterized protein (593 aa)
     
 
  0.815
VPS33B
Vacuolar protein sorting 33 homolog B (yeast) (617 aa)
     
 
  0.815
PIKFYVE
Phosphoinositide kinase, FYVE finger containing (2113 aa)
     
   
  0.753
TGFBRAP1
Transforming growth factor, beta receptor associated protein 1 (859 aa)
     
 
  0.712
SUCO
SUN domain containing ossification factor (1247 aa)
     
      0.695
VPS39
Vacuolar protein sorting 39 homolog (S. cerevisiae) (875 aa)
     
 
  0.670
SUPT5H
Suppressor of Ty 5 homolog (S. cerevisiae) (1081 aa)
     
        0.552
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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