STRINGSTRING
ENSLACG00000000190 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000000190" - Histone H2B in Latimeria chalumnae
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000000190Histone H2B ; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (135 aa)    
Predicted Functional Partners:
H2AFY
H2A histone family, member Y; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes (370 aa)
     
  0.999
H2AFY2
H2A histone family, member Y2; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes (376 aa)
     
  0.997
H2AFX
H2A histone family, member X (142 aa)
     
  0.995
HIST2H2AB
Histone cluster 2, H2ab (135 aa)
     
  0.995
H2AFV
H2A histone family, member V (149 aa)
     
  0.991
HIST1H2AA
Histone cluster 1, H2aa (133 aa)
     
  0.990
ENSLACG00000004762
Histone H2A (127 aa)
     
  0.990
ENSLACG00000002753
Histone H2A (126 aa)
     
  0.990
HIST1H4A
Histone cluster 1, H4a; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (103 aa)
     
  0.948
VPS72
Vacuolar protein sorting 72 homolog (S. cerevisiae) (373 aa)
       
 
  0.929
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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