STRINGSTRING
ENSLACG00000000193 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000000193" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000000193Uncharacterized protein (88 aa)    
Predicted Functional Partners:
MRE11A
MRE11 meiotic recombination 11 homolog A (S. cerevisiae) (710 aa)
   
  0.990
ATR
Ataxia telangiectasia and Rad3 related (2654 aa)
     
  0.912
WRN
Werner syndrome, RecQ helicase-like (1469 aa)
   
  0.904
XRCC6
X-ray repair complementing defective repair in Chinese hamster cells 6 (610 aa)
     
  0.899
SMC3
Structural maintenance of chromosomes 3 (1222 aa)
   
  0.893
XRCC5
X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) (606 aa)
     
  0.888
SPO11
SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae) (394 aa)
     
  0.885
EXO1
Exonuclease 1 (805 aa)
     
  0.884
RPA1
Replication protein A1, 70kDa (495 aa)
     
  0.865
RAD52
RAD52 homolog (S. cerevisiae) (389 aa)
     
  0.855
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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