STRINGSTRING
PSD3 protein (Latimeria chalumnae) - STRING interaction network
"PSD3" - Pleckstrin and Sec7 domain containing 3 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSD3Pleckstrin and Sec7 domain containing 3 (249 aa)    
Predicted Functional Partners:
ENSLACG00000018682
Uncharacterized protein (176 aa)
     
  0.752
ARF6
ADP-ribosylation factor 6 (175 aa)
     
  0.752
PCSK4
Proprotein convertase subtilisin/kexin type 4 (768 aa)
     
 
  0.680
PCSK7
Proprotein convertase subtilisin/kexin type 7 (760 aa)
     
 
  0.680
FURIN
Furin (paired basic amino acid cleaving enzyme) (801 aa)
     
 
  0.680
PCSK2
Proprotein convertase subtilisin/kexin type 2 (403 aa)
     
 
  0.680
PCSK1
Proprotein convertase subtilisin/kexin type 1 (662 aa)
     
 
  0.680
COPG1
Coatomer protein complex, subunit gamma 1; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (879 aa)
     
  0.520
COPG2
Coatomer protein complex, subunit gamma 2; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (873 aa)
     
  0.520
LRRK2
Leucine-rich repeat kinase 2 (2508 aa)
     
  0.513
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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