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STRINGSTRING
PSD3 protein (Latimeria chalumnae) - STRING interaction network
"PSD3" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSD3Uncharacterized protein; Pleckstrin and Sec7 domain containing 3 (249 aa)    
Predicted Functional Partners:
KCTD4
Potassium channel tetramerization domain containing 4 (256 aa)
     
   
  0.796
ENSLACG00000005918
Proprotein convertase subtilisin/kexin type 1 inhibitor, like (292 aa)
     
   
  0.661
PNRC2
Proline-rich nuclear receptor coactivator 2 (143 aa)
     
   
  0.603
IL1RAPL2
Interleukin 1 receptor accessory protein-like 2 (429 aa)
       
 
  0.561
ARF6
Uncharacterized protein; ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family (176 aa)
       
 
  0.532
ENSLACG00000004676
ADP-ribosylation factor 6b; Belongs to the small GTPase superfamily. Arf family (175 aa)
       
 
  0.532
ENSLACG00000022382
Uncharacterized protein; Belongs to the serpin family (407 aa)
     
   
  0.505
SERPINI1
Serpin family I member 1; Serpin peptidase inhibitor, clade I (neuroserpin), member 1; Belongs to the serpin family (409 aa)
     
   
  0.505
TRIM23
Tripartite motif containing 23 (583 aa)
     
 
  0.483
GATAD2A
GATA zinc finger domain containing 2A (541 aa)
           
  0.475
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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