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STRINGSTRING
SRI protein (Latimeria chalumnae) - STRING interaction network
"SRI" - Sorcin in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRISorcin (201 aa)    
Predicted Functional Partners:
PDCD6IP
Programmed cell death 6 interacting protein (732 aa)
     
 
  0.805
PTPN23
Protein tyrosine phosphatase, non-receptor type 23, a (1414 aa)
     
 
  0.748
ID3
Inhibitor of DNA binding 3, dominant negative helix-loop-helix protein (121 aa)
           
  0.748
ANXA7
Annexin A7 (495 aa)
       
 
  0.737
PIR
Pirin (iron-binding nuclear protein); Belongs to the pirin family (171 aa)
       
      0.724
PSEN2
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors; Belongs to the peptidase A22A family (458 aa)
       
 
  0.686
ID4
Inhibitor of DNA binding 4, dominant negative helix-loop-helix protein (132 aa)
           
  0.683
ID1
Inhibitor of DNA binding 1, dominant negative helix-loop-helix protein (131 aa)
           
  0.649
CHERP
Calcium homeostasis endoplasmic reticulum protein (942 aa)
       
 
  0.646
ESM1
Endothelial cell-specific molecule 1 (185 aa)
           
  0.646
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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