STRINGSTRING
ENSLACG00000000229 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000000229" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000000229Uncharacterized protein (321 aa)    
Predicted Functional Partners:
PAPD5
PAP associated domain containing 5 (682 aa)
     
 
  0.734
SKIV2L2
Superkiller viralicidic activity 2-like 2 (S. cerevisiae) (1031 aa)
     
 
  0.699
U2AF2
U2 small nuclear RNA auxiliary factor 2 (367 aa)
     
  0.591
CDC40
Cell division cycle 40 homolog (S. cerevisiae) (574 aa)
       
  0.538
PRPF19
PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae) (504 aa)
     
  0.507
PPIE
Peptidylprolyl isomerase E (cyclophilin E); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (302 aa)
     
  0.461
EXOSC10
Exosome component 10 (910 aa)
     
 
  0.441
PAPOLA
Uncharacterized protein (735 aa)
     
 
  0.425
PAPOLG
poly(A) polymerase gamma (743 aa)
     
 
  0.425
SRSF10
Serine/arginine-rich splicing factor 10 (252 aa)
     
  0.419
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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