STRINGSTRING
ENSLACG00000000231 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000000231" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000000231Uncharacterized protein (276 aa)    
Predicted Functional Partners:
MED17
Mediator complex subunit 17 (640 aa)
     
  0.955
MED14
Mediator complex subunit 14 (1445 aa)
     
  0.949
MED7
Mediator complex subunit 7 (235 aa)
     
  0.878
MED6
Mediator complex subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (244 aa)
     
  0.866
MED16
Mediator complex subunit 16 (834 aa)
     
  0.850
MED1
Mediator complex subunit 1 (1401 aa)
     
  0.829
MED23
Mediator complex subunit 23 (1277 aa)
     
  0.822
MED10
Mediator complex subunit 10 (135 aa)
       
  0.820
CDSN
Corneodesmosin (472 aa)
     
  0.793
CCNC
Cyclin C (293 aa)
     
  0.780
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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