• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
CPSF1 protein (Latimeria chalumnae) - STRING interaction network
"CPSF1" - Cleavage and polyadenylation specific factor 1, 160kDa in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPSF1Cleavage and polyadenylation specific factor 1, 160kDa (1387 aa)    
Predicted Functional Partners:
CPSF2
Cleavage and polyadenylation specific factor 2 (782 aa)
     
  0.996
CPSF3
Cleavage and polyadenylation specific factor 3, 73kDa (689 aa)
     
  0.995
CPSF4
Cleavage and polyadenylation specific factor 4 (270 aa)
     
  0.993
FIP1L1
FIP1 like 1b (S. cerevisiae); Factor interacting with PAPOLA and CPSF1 (532 aa)
     
  0.990
WDR33
WD repeat domain 33 (1338 aa)
     
  0.990
ENSLACG00000011944
Uncharacterized protein (504 aa)
     
  0.984
CSTF3
Cleavage stimulation factor, 3’ pre-RNA, subunit 3 (715 aa)
     
 
  0.975
YTHDC2
YTH domain containing 2 (1429 aa)
     
 
  0.972
SYMPK
Symplekin (1203 aa)
     
 
  0.969
ENSLACG00000015927
Cleavage stimulation factor, 3’ pre-RNA, subunit 2 (588 aa)
     
 
  0.962
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
Server load: low (14%) [HD]