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RIOK2 protein (Latimeria chalumnae) - STRING interaction network
"RIOK2" - RIO kinase 2 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIOK2RIO kinase 2 (yeast) (542 aa)    
Predicted Functional Partners:
TSR1
TSR1, 20S rRNA accumulation, homolog (S. cerevisiae) (820 aa)
     
  0.986
PNO1
Partner of NOB1 homolog (S. cerevisiae) (250 aa)
     
  0.980
NOB1
NIN1/RPN12 binding protein 1 homolog (S. cerevisiae) (456 aa)
     
  0.978
LTV1
LTV1 homolog (S. cerevisiae) (480 aa)
     
  0.964
KRR1
KRR1, small subunit (SSU) processome component, homolog (yeast); Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (379 aa)
     
  0.952
IMP4
IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) (291 aa)
     
 
  0.943
DIMT1
DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae) (306 aa)
     
 
  0.938
TFB2M
Transcription factor B2, mitochondrial (375 aa)
     
 
  0.903
PWP2
PWP2 periodic tryptophan protein homolog (yeast) (873 aa)
     
 
  0.883
CSNK1D
Casein kinase 1, delta (417 aa)
     
  0.882
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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