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CNOT8 protein (Latimeria chalumnae) - STRING interaction network
"CNOT8" - CCR4-NOT transcription complex, subunit 8 in Latimeria chalumnae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNOT8CCR4-NOT transcription complex, subunit 8 (210 aa)    
Predicted Functional Partners:
CNOT6L
CCR4-NOT transcription complex, subunit 6-like (553 aa)
     
  0.982
CNOT1
CCR4-NOT transcription complex, subunit 1 (2413 aa)
     
  0.976
RQCD1
RCD1 required for cell differentiation1 homolog (S. pombe) (299 aa)
     
  0.947
CCRN4L
CCR4 carbon catabolite repression 4-like (S. cerevisiae) (446 aa)
     
  0.936
PDE12
Phosphodiesterase 12 (587 aa)
     
  0.936
CNOT3
CCR4-NOT transcription complex, subunit 3 (727 aa)
     
  0.928
CNOT2
CCR4-NOT transcription complex, subunit 2 (534 aa)
     
  0.915
ANGEL1
Angel homolog 1 (Drosophila) (498 aa)
     
  0.823
CNOT4
CCR4-NOT transcription complex, subunit 4 (764 aa)
     
  0.794
PUM1
Pumilio homolog 1 (Drosophila) (1192 aa)
     
 
  0.712
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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