STRINGSTRING
ENSLACG00000000288 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000000288" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000000288Uncharacterized protein (205 aa)    
Predicted Functional Partners:
MEAF6
MYST/Esa1-associated factor 6 (200 aa)
           
  0.609
DOLK
Dolichol kinase (528 aa)
           
  0.589
PNKD
Paroxysmal nonkinesigenic dyskinesia (304 aa)
           
  0.577
AP4E1
Adaptor-related protein complex 4, epsilon 1 subunit (1137 aa)
           
  0.573
COA5
Cytochrome c oxidase assembly factor 5 (75 aa)
           
  0.558
THAP11
THAP domain containing 11 (260 aa)
     
   
  0.553
ENSLACG00000017937
Uncharacterized protein (335 aa)
       
 
  0.537
ENSLACG00000012356
PRKC, apoptosis, WT1, regulator (118 aa)
       
 
  0.537
KRR1
KRR1, small subunit (SSU) processome component, homolog (yeast); Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (379 aa)
     
   
  0.476
ZMYM4
Zinc finger, MYM-type 4 (1555 aa)
           
  0.476
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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