STRINGSTRING
PYCRL protein (Latimeria chalumnae) - STRING interaction network
"PYCRL" - Pyrroline-5-carboxylate reductase-like in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PYCRLPyrroline-5-carboxylate reductase-like (252 aa)    
Predicted Functional Partners:
ALDH18A1
Aldehyde dehydrogenase 18 family, member A1 (796 aa)
 
   
  0.949
PRODH
Proline dehydrogenase (oxidase) 1 (628 aa)
   
  0.926
PRODH2
Proline dehydrogenase (oxidase) 2 (433 aa)
   
  0.926
ENSLACG00000004369
Uncharacterized protein (424 aa)
     
  0.925
ALDH4A1
Aldehyde dehydrogenase 4 family, member A1 (1427 aa)
     
 
  0.912
LAP3
Leucine aminopeptidase 3 (521 aa)
   
 
  0.910
P4HA1
Prolyl 4-hydroxylase, alpha polypeptide I (535 aa)
     
 
    0.900
P4HA2
Prolyl 4-hydroxylase, alpha polypeptide II (541 aa)
     
 
    0.900
P4HA3
Prolyl 4-hydroxylase, alpha polypeptide III (355 aa)
     
 
    0.900
CAD
Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase (2203 aa)
   
   
  0.714
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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