STRINGSTRING
ENSLACG00000000306 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000000306" - Nucleoporin 205kDa in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000000306Nucleoporin 205kDa (1492 aa)    
Predicted Functional Partners:
NUP93
Nucleoporin 93kDa (722 aa)
     
  0.997
NUP153
Nucleoporin 153kDa (1449 aa)
     
  0.953
NUP107
Nucleoporin 107kDa (930 aa)
     
  0.926
ENSLACG00000003058
Uncharacterized protein (1004 aa)
     
  0.910
NXF1
Nuclear RNA export factor 1 (628 aa)
     
  0.903
SEH1L
SEH1-like (S. cerevisiae) (468 aa)
     
  0.895
NUP155
Nucleoporin 155kDa (385 aa)
     
  0.873
NUP133
Nucleoporin 133kDa (1421 aa)
     
 
  0.869
ENSLACG00000004309
Uncharacterized protein (347 aa)
     
  0.867
NUP62CL
Nucleoporin 62kDa C-terminal like (555 aa)
     
  0.867
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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