STRINGSTRING
ENSLACG00000000306 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000000306" - Nucleoporin 205 in Latimeria chalumnae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000000306Nucleoporin 205 (1492 aa)    
Predicted Functional Partners:
NUP93
Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance (722 aa)
     
  0.989
NUP155
Uncharacterized protein; Nucleoporin 155 (385 aa)
     
 
  0.904
ENSLACG00000003058
Nucleoporin 155 (1004 aa)
     
 
  0.904
NUP107
Nucleoporin 107kDa (930 aa)
     
 
  0.895
NUP133
Nucleoporin 133kDa; Belongs to the actin family (1421 aa)
     
 
  0.861
NUP62CL
Nucleoporin 62 like (555 aa)
     
 
  0.860
NUP54
Nucleoporin 54kDa (504 aa)
     
 
  0.853
NUPL1
Nucleoporin like 1 (604 aa)
     
 
  0.852
NUP153
Nucleoporin 153kDa (1449 aa)
     
 
  0.775
NUP98
Nucleoporin 98kDa (1790 aa)
     
 
  0.760
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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