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IDI1 protein (Latimeria chalumnae) - STRING interaction network
"IDI1" - Isopentenyl-diphosphate delta isomerase 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IDI1Isopentenyl-diphosphate delta isomerase 1 (278 aa)    
Predicted Functional Partners:
MVD
Mevalonate (diphospho) decarboxylase (400 aa)
   
 
  0.973
RUSC1
RUN and SH3 domain containing 1 (800 aa)
   
 
  0.968
GGPS1
Geranylgeranyl diphosphate synthase 1 (338 aa)
   
 
  0.963
HMGCS1
3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) (525 aa)
   
   
  0.806
FDFT1
Farnesyl-diphosphate farnesyltransferase 1 (416 aa)
   
   
  0.787
SQLE
Squalene epoxidase (506 aa)
     
   
  0.781
ENSLACG00000013323
Uncharacterized protein (433 aa)
     
   
  0.775
ENSLACG00000012992
Uncharacterized protein (552 aa)
     
   
  0.775
ENSLACG00000012175
Uncharacterized protein (566 aa)
     
   
  0.775
ENSLACG00000011395
Squalene monooxygenase (479 aa)
     
   
  0.775
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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