STRINGSTRING
ENSLACG00000000313 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000000313" - Uncharacterized protein in Latimeria chalumnae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000000313Uncharacterized protein (204 aa)    
Predicted Functional Partners:
H2AFV
H2A histone family, member V (149 aa)
     
 
  0.756
H2AFY
H2A histone family, member Y; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes (370 aa)
     
 
  0.725
H2AFY2
H2A histone family, member Y2; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes (376 aa)
     
 
  0.659
HIST1H4A
Histone cluster 1, H4a; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (103 aa)
     
 
  0.604
CDK1
Cyclin-dependent kinase 1 (302 aa)
     
 
  0.599
CDK2
Cyclin-dependent kinase 2 (298 aa)
     
 
  0.599
CDK17
Cyclin-dependent kinase 17 (525 aa)
     
 
  0.599
ENSLACG00000016313
Cyclin-dependent kinase 17 (431 aa)
     
 
  0.599
ENSLACG00000012491
Uncharacterized protein (327 aa)
     
 
  0.599
CDK15
Cyclin-dependent kinase 15 (397 aa)
     
 
  0.599
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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