STRINGSTRING
ENSLACG00000000316 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000000316" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000000316Uncharacterized protein (702 aa)    
Predicted Functional Partners:
MTERFD1
MTERF domain containing 1 (416 aa)
     
   
  0.584
MAP7D1
MAP7 domain containing 1 (685 aa)
           
  0.584
C1orf112
Chromosome 1 open reading frame 112 (228 aa)
 
            0.537
GINS1
GINS complex subunit 1 (Psf1 homolog) (196 aa)
     
   
  0.514
MTERF
Mitochondrial transcription termination factor (397 aa)
     
   
  0.408
MTERFD3
MTERF domain containing 3 (386 aa)
     
   
  0.408
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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