STRINGSTRING
RNF17 protein (Latimeria chalumnae) - STRING interaction network
"RNF17" - Ring finger protein 17 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF17Ring finger protein 17 (1141 aa)    
Predicted Functional Partners:
PIWIL2
Piwi-like 2 (Drosophila) (954 aa)
     
  0.950
PIWIL1
Piwi-like 1 (Drosophila) (877 aa)
     
  0.949
PIWIL4
Piwi-like 4 (Drosophila) (579 aa)
     
  0.948
MTDH
Metadherin (606 aa)
       
      0.671
TDRD9
Tudor domain containing 9 (1265 aa)
     
  0.668
TDRKH
Tudor and KH domain containing (417 aa)
     
 
  0.622
TDRD1
Tudor domain containing 1 (1170 aa)
     
0.603
YTHDC2
YTH domain containing 2 (1429 aa)
     
  0.595
TDRD3
Tudor domain containing 3 (746 aa)
     
 
  0.588
DHX9
DEAH (Asp-Glu-Ala-His) box polypeptide 9 (1249 aa)
     
  0.582
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
Server load: low (8%) [HD]