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TFAP4 protein (Latimeria chalumnae) - STRING interaction network
"TFAP4" - Transcription factor AP-4 (activating enhancer binding protein 4) in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TFAP4Transcription factor AP-4 (activating enhancer binding protein 4) (350 aa)    
Predicted Functional Partners:
BPTF
Bromodomain PHD finger transcription factor (3013 aa)
       
      0.859
NBR1
Neighbor of BRCA1 gene 1 (1005 aa)
           
  0.575
DCLRE1A
DNA cross-link repair 1A (1028 aa)
     
   
  0.426
HBS1L
HBS1-like (S. cerevisiae) (490 aa)
           
  0.424
ENSLACG00000015253
Activating signal cointegrator 1 complex subunit 3 (1030 aa)
     
      0.419
SNRNP200
Small nuclear ribonucleoprotein 200kDa (U5) (1764 aa)
     
      0.419
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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