STRINGSTRING
ENSLACG00000000335 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000000335" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000000335Uncharacterized protein (214 aa)    
Predicted Functional Partners:
ROBO4
Roundabout, axon guidance receptor, homolog 4 (Drosophila) (277 aa)
     
  0.854
ENSLACG00000013255
Uncharacterized protein (779 aa)
     
  0.854
ROBO3
Roundabout, axon guidance receptor, homolog 3 (Drosophila) (1469 aa)
     
  0.854
ENSLACG00000009470
Uncharacterized protein (104 aa)
     
  0.854
ROBO2
Roundabout, axon guidance receptor, homolog 2 (Drosophila) (1213 aa)
     
  0.854
ROBO1
Roundabout, axon guidance receptor, homolog 1 (Drosophila) (1421 aa)
     
  0.854
PPIE
Peptidylprolyl isomerase E (cyclophilin E); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (302 aa)
     
  0.847
RAD54B
RAD54 homolog B (S. cerevisiae) (2005 aa)
   
  0.758
MYO16
Myosin XVI (786 aa)
     
  0.700
DHX8
DEAH (Asp-Glu-Ala-His) box polypeptide 8 (1211 aa)
     
  0.691
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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