STRINGSTRING
RAB3A protein (Latimeria chalumnae) - STRING interaction network
RAB3A, member RAS oncogene family in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB3ARAB3A, member RAS oncogene family (158 aa)    
Predicted Functional Partners:
IFT27
Intraflagellar transport 27 homolog (Chlamydomonas) (186 aa)
   
 
 
0.815
RAB35
RAB35, member RAS oncogene family (203 aa)
   
 
 
0.803
SYT1
Synaptotagmin I (384 aa)
     
 
  0.677
SYT5
Synaptotagmin V (371 aa)
     
 
  0.677
TNFAIP3
Tumor necrosis factor, alpha-induced protein 3 (785 aa)
           
  0.660
ENSLACG00000015658
Unc-13 homolog A (C. elegans) (1646 aa)
     
 
  0.574
ENSLACG00000013359
Uncharacterized protein (171 aa)
     
 
  0.574
UNC13A
Unc-13 homolog A (C. elegans) (1639 aa)
     
 
  0.574
UNC13C
Unc-13 homolog C (C. elegans) (2038 aa)
     
 
  0.574
PIAS2
Protein inhibitor of activated STAT, 2 (564 aa)
           
  0.570
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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