STRINGSTRING
TM9SF1 protein (Latimeria chalumnae) - STRING interaction network
"TM9SF1" - Transmembrane 9 superfamily member 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM9SF1Transmembrane 9 superfamily member 1 (471 aa)    
Predicted Functional Partners:
CHMP1A
Charged multivesicular body protein 1A (206 aa)
     
  0.576
CHMP2A
Charged multivesicular body protein 2A (295 aa)
     
  0.520
CHMP3
Charged multivesicular body protein 3 (220 aa)
     
  0.509
PDCD6IP
Programmed cell death 6 interacting protein (732 aa)
       
  0.478
CHMP1B
Charged multivesicular body protein 1B (161 aa)
     
  0.452
IST1
Increased sodium tolerance 1 homolog (yeast) (260 aa)
       
 
  0.442
CHMP4C
Charged multivesicular body protein 4C (240 aa)
       
  0.440
CHMP6
Charged multivesicular body protein 6 (146 aa)
       
  0.439
AICDA
Activation-induced cytidine deaminase (149 aa)
           
  0.424
ENSLACG00000000734
Uncharacterized protein (60 aa)
           
  0.424
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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