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STRINGSTRING
IFT140 protein (Latimeria chalumnae) - STRING interaction network
"IFT140" - Intraflagellar transport 140 homolog in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IFT140Intraflagellar transport 140 homolog (Chlamydomonas) (1471 aa)    
Predicted Functional Partners:
IFT122
Intraflagellar transport 122 (1118 aa)
     
 
  0.984
IFT81
Intraflagellar transport 81 (680 aa)
     
 
  0.957
IFT43
Uncharacterized protein; Intraflagellar transport 43 (124 aa)
     
 
  0.942
IFT80
Intraflagellar transport 80 (780 aa)
     
 
  0.932
TTC21B
Tetratricopeptide repeat domain 21B (1311 aa)
     
 
  0.898
WDR35
WD repeat domain 35 (1181 aa)
     
 
  0.898
TRAF3IP1
TNF receptor-associated factor 3 interacting protein 1 (709 aa)
     
   
  0.897
IFT20
Intraflagellar transport 20 (132 aa)
     
 
  0.895
IFT88
Intraflagellar transport 88 (833 aa)
     
   
  0.895
IFT57
Intraflagellar transport 57 (428 aa)
     
   
  0.892
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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