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PTPLB protein (Latimeria chalumnae) - STRING interaction network
"PTPLB" - Protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPLBProtein tyrosine phosphatase-like (proline instead of catalytic arginine), member b (148 aa)    
Predicted Functional Partners:
TECRL
trans-2,3-enoyl-CoA reductase-like (317 aa)
     
  0.974
TECR
trans-2,3-enoyl-CoA reductase (166 aa)
     
  0.974
HSD17B12
Hydroxysteroid (17-beta) dehydrogenase 12 (318 aa)
     
  0.923
PTPLAD1
Protein tyrosine phosphatase-like A domain containing 1 (359 aa)
     
 
0.806
PTPLA
Protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A (265 aa)
         
 
0.800
ACACA
acetyl-CoA carboxylase alpha (2312 aa)
     
   
  0.506
ACACB
acetyl-CoA carboxylase beta (2311 aa)
     
   
  0.506
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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