STRINGSTRING
KCTD13 protein (Latimeria chalumnae) - STRING interaction network
"KCTD13" - Potassium channel tetramerisation domain containing 13 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCTD13Potassium channel tetramerisation domain containing 13 (336 aa)    
Predicted Functional Partners:
SHKBP1
SH3KBP1 binding protein 1 (730 aa)
           
  0.520
KCTD3
Potassium channel tetramerisation domain containing 3 (797 aa)
           
  0.520
CUL3
Cullin 3 (769 aa)
     
 
  0.457
HELZ2
Helicase with zinc finger 2, transcriptional coactivator (2883 aa)
           
  0.447
CUL4B
Cullin 4B (845 aa)
     
 
  0.440
CUL4A
Cullin 4A (851 aa)
     
 
  0.440
DHX33
DEAH (Asp-Glu-Ala-His) box polypeptide 33 (680 aa)
           
  0.407
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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