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PLBD1 protein (Latimeria chalumnae) - STRING interaction network
"PLBD1" - Phospholipase B domain containing 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLBD1Phospholipase B domain containing 1 (127 aa)    
Predicted Functional Partners:
WIPF3
WAS/WASL interacting protein family, member 3 (481 aa)
           
  0.450
PIF1
PIF1 5’-to-3’ DNA helicase homolog (S. cerevisiae) (630 aa)
     
   
  0.441
RGS4
Regulator of G-protein signaling 4 (194 aa)
     
   
  0.431
AGMAT
Agmatine ureohydrolase (agmatinase) (367 aa)
           
  0.430
GRIK3
Glutamate receptor, ionotropic, kainate 3 (895 aa)
           
  0.430
GIPC3
GIPC PDZ domain containing family, member 3 (319 aa)
           
  0.430
STX1B
Syntaxin 1B (283 aa)
           
  0.430
ALCAM
Activated leukocyte cell adhesion molecule (530 aa)
           
  0.429
MYO16
Myosin XVI (786 aa)
       
 
  0.426
ESPN
Espin (862 aa)
           
  0.426
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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