STRINGSTRING
ITGB6 protein (Latimeria chalumnae) - STRING interaction network
"ITGB6" - Integrin, beta 6 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ITGB6Integrin, beta 6 (675 aa)    
Predicted Functional Partners:
ITGA8
Integrin, alpha 8 (1048 aa)
     
  0.986
ENSLACG00000000563
Uncharacterized protein (175 aa)
     
  0.978
ITGAV
Uncharacterized protein; Integrin, alpha V (597 aa)
     
  0.978
ITGA4
Integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor) (1037 aa)
     
  0.977
ITGA9
Uncharacterized protein; Integrin, alpha 9 (480 aa)
     
  0.968
ITGA3
Integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) (1012 aa)
     
  0.957
ITGA6
Integrin, alpha 6 (1077 aa)
     
  0.951
ITGA1
Integrin, alpha 1 (1185 aa)
     
  0.926
ITGA10
Integrin, alpha 10 (1177 aa)
     
  0.920
ITGA11
Integrin, alpha 11 (1136 aa)
     
  0.920
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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