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C2CD3 protein (Latimeria chalumnae) - STRING interaction network
"C2CD3" - C2 calcium-dependent domain containing 3 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2CD3C2 calcium-dependent domain containing 3 (829 aa)    
Predicted Functional Partners:
CEP76
Centrosomal protein 76kDa (638 aa)
         
  0.735
ELMOD2
ELMO/CED-12 domain containing 2 (298 aa)
     
   
  0.729
CEP89
Centrosomal protein 89kDa (662 aa)
         
  0.720
PPME1
Protein phosphatase methylesterase 1; Demethylates proteins that have been reversibly carboxymethylated (294 aa)
     
   
  0.719
SCLT1
Sodium channel and clathrin linker 1 (698 aa)
     
 
  0.695
CAMKK1
Calcium/calmodulin-dependent protein kinase kinase 1, alpha (489 aa)
           
  0.683
FBF1
Fas (TNFRSF6) binding factor 1 (1058 aa)
         
  0.674
CEP135
Centrosomal protein 135kDa (594 aa)
     
 
  0.665
TBC1D9B
TBC1 domain family, member 9B (with GRAM domain) (1228 aa)
     
   
  0.662
TBC1D9
TBC1 domain family, member 9 (with GRAM domain) (1258 aa)
     
   
  0.662
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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