STRINGSTRING
ENSLACG00000000416 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000000416" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000000416Uncharacterized protein (217 aa)    
Predicted Functional Partners:
UFD1L
Ubiquitin fusion degradation 1 like (yeast) (302 aa)
     
 
  0.627
NPLOC4
Nuclear protein localization 4 homolog (S. cerevisiae) (612 aa)
     
 
  0.620
PLAA
Phospholipase A2-activating protein (470 aa)
     
 
  0.604
TRIP13
Thyroid hormone receptor interactor 13 (432 aa)
     
  0.572
NVL
Nuclear VCP-like (860 aa)
     
  0.560
SPATA5L1
Spermatogenesis associated 5-like 1 (792 aa)
     
  0.556
ENSLACG00000018930
Uncharacterized protein (744 aa)
     
  0.556
ENSLACG00000016742
Uncharacterized protein (235 aa)
     
  0.556
SPAST
Spastin (527 aa)
     
  0.556
SPATA5
Spermatogenesis associated 5 (795 aa)
     
  0.556
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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