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STRINGSTRING
STX7 protein (Latimeria chalumnae) - STRING interaction network
"STX7" - Syntaxin 7 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STX7Syntaxin 7; Belongs to the syntaxin family (261 aa)    
Predicted Functional Partners:
STX8
Syntaxin 8 (235 aa)
     
  0.991
VTI1B
Vesicle transport through interaction with t-SNAREs 1B (235 aa)
     
  0.983
VTI1A
Vesicle transport through interaction with t-SNAREs 1A (214 aa)
     
  0.978
VAMP7
Vesicle-associated membrane protein 7; Belongs to the synaptobrevin family (220 aa)
     
 
  0.902
STX6
Syntaxin 6; Belongs to the syntaxin family (265 aa)
     
 
  0.884
VAMP8
Vesicle-associated membrane protein 8 (104 aa)
     
 
  0.880
VPS16
VPS16, CORVET/HOPS core subunit; Vacuolar protein sorting protein 16 (823 aa)
       
 
  0.869
VPS45
Vacuolar protein sorting 45 homolog (S. cerevisiae); Belongs to the STXBP/unc-18/SEC1 family (570 aa)
     
 
  0.863
SEC22B
SEC22 vesicle trafficking protein homolog B (S. cerevisiae), a; Belongs to the synaptobrevin family (215 aa)
     
 
  0.843
GOSR1
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide- sensitive factor) attachment protein receptor (250 aa)
     
 
  0.824
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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