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VAMP2 protein (Latimeria chalumnae) - STRING interaction network
"VAMP2" - Vesicle-associated membrane protein 2 (synaptobrevin 2) in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VAMP2Vesicle-associated membrane protein 2 (synaptobrevin 2) (119 aa)    
Predicted Functional Partners:
SNAP25
Synaptosomal-associated protein, 25kDa (206 aa)
     
  0.995
STX1A
Syntaxin 1A (brain) (290 aa)
     
  0.989
STX1B
Syntaxin 1B (283 aa)
     
  0.989
STX2
Syntaxin 2 (277 aa)
     
  0.988
STX3
Syntaxin 3 (274 aa)
     
  0.985
SNAP23
Synaptosomal-associated protein, 23kDa (206 aa)
     
  0.979
STX4
Syntaxin 4 (242 aa)
     
  0.974
ENSLACG00000013510
Uncharacterized protein (293 aa)
     
  0.972
ENSLACG00000005651
Synaptosomal-associated protein (209 aa)
     
  0.946
SYT1
Synaptotagmin I (384 aa)
     
  0.923
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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