STRINGSTRING
ENSLACG00000000472 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000000472" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000000472Uncharacterized protein (262 aa)    
Predicted Functional Partners:
ASCC1
Activating signal cointegrator 1 complex subunit 1 (354 aa)
       
      0.611
CRIM1
Cysteine rich transmembrane BMP regulator 1 (chordin-like) (881 aa)
       
      0.611
PAX6
Paired box 6 (463 aa)
       
      0.607
BECN1
Beclin 1, autophagy related (447 aa)
     
 
  0.447
ENSLACG00000018350
Uncharacterized protein (317 aa)
           
  0.447
ARHGEF18
Rho guanine nucleotide exchange factor 18 (1052 aa)
           
  0.447
PAX7
Paired box 7 (420 aa)
       
      0.429
PAX3
Paired box 3 (488 aa)
       
      0.429
DHRS7B
Dehydrogenase/reductase (SDR family) member 7B (323 aa)
       
      0.407
ATG4A
Autophagy related 4A, cysteine peptidase (385 aa)
     
 
  0.402
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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