STRINGSTRING
ENSLACG00000000478 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000000478" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000000478Uncharacterized protein (341 aa)    
Predicted Functional Partners:
FBL
Fibrillarin (343 aa)
     
 
  0.876
HIST1H4A
Histone cluster 1, H4a; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (103 aa)
       
  0.817
KIAA0020
KIAA0020 (641 aa)
     
        0.806
UTP15
UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae) (524 aa)
     
        0.771
RPS2
Ribosomal protein S2 (290 aa)
     
 
  0.768
WDR43
WD repeat domain 43 (679 aa)
     
        0.735
WDR12
WD repeat domain 12 (339 aa)
     
        0.712
GTPBP4
GTP binding protein 4; Involved in the biogenesis of the 60S ribosomal subunit (634 aa)
     
        0.709
DCAF13
DDB1 and CUL4 associated factor 13 (472 aa)
     
   
  0.703
BRIX1
BRX1, biogenesis of ribosomes, homolog (S. cerevisiae) (345 aa)
     
        0.694
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
Server load: low (12%) [HD]