• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
RNF220 protein (Latimeria chalumnae) - STRING interaction network
"RNF220" - Ring finger protein 220 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF220Ring finger protein 220 (296 aa)    
Predicted Functional Partners:
MICALL2
Uncharacterized protein; MICAL-like 2 (800 aa)
           
  0.821
VRK1
Vaccinia related kinase 1; Belongs to the protein kinase superfamily (480 aa)
     
   
  0.794
B4GALT2
Beta-1,4-galactosyltransferase 2; UDP-Gal-betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 (376 aa)
     
   
  0.629
DMAP1
DNA methyltransferase 1 associated protein 1 (402 aa)
     
   
  0.618
DMRTA1
DMRT-like family A1 (461 aa)
           
  0.548
TMEM53
Transmembrane protein 53 (282 aa)
           
  0.548
PUF60
poly-U binding splicing factor b (366 aa)
     
   
  0.533
PAX9
Paired box gene 9 (342 aa)
           
  0.529
NRBP2
Nuclear receptor binding protein 2 (458 aa)
           
  0.518
BCL11A
B-cell CLL/lymphoma 11A (zinc finger protein) (798 aa)
           
  0.508
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
Server load: low (10%) [HD]