STRINGSTRING
DTNA protein (Latimeria chalumnae) - STRING interaction network
"DTNA" - Dystrobrevin, alpha in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DTNADystrobrevin, alpha (568 aa)    
Predicted Functional Partners:
ENSLACG00000011211
Utrophin (2573 aa)
       
 
  0.861
SNTB1
Syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) (521 aa)
     
 
  0.820
MYH1
Myosin-16 (848 aa)
     
 
  0.807
DLG5
Discs, large homolog 5 (Drosophila) (1821 aa)
     
      0.802
NDUFB10
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10, 22kDa (174 aa)
       
      0.802
P4HB
Prolyl 4-hydroxylase, beta polypeptide (505 aa)
       
 
  0.779
ENSLACG00000000412
Dystrophin (1951 aa)
 
   
 
  0.774
PDIA2
Protein disulfide isomerase family A, member 2 (527 aa)
       
      0.767
ENSLACG00000004820
Uncharacterized protein (230 aa)
     
 
  0.719
CTNNAL1
Catenin (cadherin-associated protein), alpha-like 1 (674 aa)
     
 
  0.706
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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