STRINGSTRING
PTPN23 protein (Latimeria chalumnae) - STRING interaction network
"PTPN23" - Protein tyrosine phosphatase, non-receptor type 23 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPN23Protein tyrosine phosphatase, non-receptor type 23 (1414 aa)    
Predicted Functional Partners:
CHMP4C
Charged multivesicular body protein 4C (240 aa)
     
  0.931
CHMP4B
Charged multivesicular body protein 4B (225 aa)
     
  0.931
CHMP4A
Charged multivesicular body protein 4A (221 aa)
     
  0.931
GRAP
Uncharacterized protein (99 aa)
     
  0.924
GRAP2
GRB2-related adaptor protein 2 (309 aa)
     
  0.924
GRB2
Growth factor receptor-bound protein 2 (292 aa)
     
  0.924
MAPK7
Mitogen-activated protein kinase 7 (927 aa)
     
  0.914
MAPK4
Mitogen-activated protein kinase 4 (578 aa)
     
  0.912
ENSLACG00000016263
Uncharacterized protein (103 aa)
     
  0.912
ENSLACG00000016060
Uncharacterized protein (82 aa)
     
  0.912
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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