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OTUD5 protein (Latimeria chalumnae) - STRING interaction network
"OTUD5" - OTU domain containing 5 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTUD5OTU domain containing 5 (534 aa)    
Predicted Functional Partners:
TRAF3
TNF receptor-associated factor 3 (567 aa)
       
  0.890
ENSLACG00000013172
Uncharacterized protein (564 aa)
         
    0.800
TP53
Tumor protein p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression (401 aa)
       
      0.590
TDRD10
Tudor domain containing 10 (357 aa)
           
  0.552
CNOT2
CCR4-NOT transcription complex, subunit 2 (534 aa)
     
   
  0.478
YOD1
YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae) (304 aa)
     
   
  0.430
TAF7
TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa (366 aa)
           
  0.403
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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