STRINGSTRING
SIPA1L1 protein (Latimeria chalumnae) - STRING interaction network
"SIPA1L1" - Signal-induced proliferation-associated 1 like 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIPA1L1Signal-induced proliferation-associated 1 like 1 (1414 aa)    
Predicted Functional Partners:
RAP2A
RAP2A, member of RAS oncogene family (183 aa)
     
  0.707
RAP2B
RAP2B, member of RAS oncogene family (183 aa)
     
  0.707
RAP2C
RAP2C, member of RAS oncogene family (183 aa)
     
  0.707
RAD54B
RAD54 homolog B (S. cerevisiae) (2005 aa)
     
  0.640
ENSLACG00000011917
Uncharacterized protein (663 aa)
     
   
  0.620
MIDN
Midnolin (524 aa)
       
      0.602
ENSLACG00000015950
Uncharacterized protein (697 aa)
     
      0.592
VCP
Valosin containing protein (801 aa)
     
      0.592
RAP1A
RAP1A, member of RAS oncogene family (185 aa)
     
  0.591
RAP1B
RAP1B, member of RAS oncogene family (184 aa)
     
  0.591
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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