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STRINGSTRING
ENSLACG00000000535 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000000535" - annotation not available in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000000535annotation not available (1697 aa)    
Predicted Functional Partners:
USH1C
USH1 protein network component harmonin; Usher syndrome 1C (autosomal recessive, severe) (830 aa)
       
 
  0.761
FJX1
Four jointed box 1 (Drosophila) (316 aa)
     
 
  0.636
YAP1
Yes-associated protein 1 (324 aa)
     
 
  0.507
PCDH15
Uncharacterized protein; Protocadherin-related 15 (249 aa)
     
 
0.498
STK4
Serine/threonine kinase 4 (488 aa)
           
  0.493
VANGL2
Vang-like 2 (van gogh, Drosophila) (498 aa)
     
 
  0.493
VANGL1
Vang-like 1 (van gogh, Drosophila) (526 aa)
     
 
  0.489
RRM1
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (763 aa)
           
  0.461
STIM1
Stromal interaction molecule 1 (662 aa)
           
  0.455
MYO7B
Myosin VIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family (2098 aa)
     
 
  0.437
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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