STRINGSTRING
ENSLACG00000000552 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000000552" - Perilipin in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000000552Perilipin (344 aa)    
Predicted Functional Partners:
RHOBTB3
Rho-related BTB domain containing 3 (608 aa)
       
  0.755
RAB9B
RAB9B, member RAS oncogene family (213 aa)
     
  0.709
M6PR
Mannose-6-phosphate receptor (cation dependent) (276 aa)
       
  0.617
IGF2R
Insulin-like growth factor 2 receptor (989 aa)
       
  0.601
ENSLACG00000017780
Uncharacterized protein (225 aa)
       
  0.580
RABEPK
Rab9 effector protein with kelch motifs (420 aa)
     
 
    0.543
VAMP3
Vesicle-associated membrane protein 3 (138 aa)
     
 
    0.542
ENSLACG00000016941
Ras homolog family member A (193 aa)
     
  0.460
RHOC
Uncharacterized protein (193 aa)
     
  0.460
PGRMC1
Progesterone receptor membrane component 1 (179 aa)
           
  0.459
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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