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HADHB protein (Latimeria chalumnae) - STRING interaction network
"HADHB" - hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit in Latimeria chalumnae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HADHBhydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit (459 aa)    
Predicted Functional Partners:
HADHA
hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit (766 aa)
 
  0.999
EHHADH
enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase (537 aa)
   
  0.997
HADH
hydroxyacyl-CoA dehydrogenase (309 aa)
   
  0.993
HMGCS1
3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) (525 aa)
   
  0.992
ACADM
acyl-CoA dehydrogenase, C-4 to C-12 straight chain (424 aa)
   
 
  0.971
ACADVL
acyl-CoA dehydrogenase, very long chain (594 aa)
   
 
  0.970
ECHDC1
Enoyl CoA hydratase domain containing 1 (331 aa)
   
  0.968
ACOX3
acyl-CoA oxidase 3, pristanoyl (708 aa)
   
 
  0.968
ACADS
acyl-CoA dehydrogenase, C-2 to C-3 short chain (410 aa)
   
 
  0.968
ACOX1
acyl-CoA oxidase 1, palmitoyl (661 aa)
   
 
  0.968
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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