STRINGSTRING
ENSLACG00000000563 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000000563" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000000563Uncharacterized protein (175 aa)    
Predicted Functional Partners:
ITGB6
Integrin, beta 6 (675 aa)
     
  0.978
ITGB8
Integrin, beta 8 (637 aa)
     
  0.969
FN1
Uncharacterized protein; Fibronectin 1 (2295 aa)
     
  0.966
ITGB1
Integrin beta (570 aa)
     
  0.954
ENSLACG00000001067
Integrin beta (822 aa)
     
  0.954
VTN
Vitronectin (492 aa)
       
  0.934
ENSLACG00000009401
Integrin beta 3b (769 aa)
     
 
  0.919
ITGB7
Integrin, beta 7 (778 aa)
     
  0.902
ITGB4
Integrin, beta 4 (1787 aa)
     
  0.887
VWF
Von Willebrand factor (2833 aa)
     
  0.862
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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